MidnightBSD Magus

science/R-cran-eco

R Package for Ecological Inference in 2x2 Tables

License Permissions: dist-mirror dist-sell pkg-mirror pkg-sell auto-accept

Events

Log

===>  Testing for R-cran-eco-4.0.3
* using log directory '/magus/work/usr/mports/science/R-cran-eco/work/eco.Rcheck'
* using R version 4.4.0 (2024-04-24)
* using platform: i386-portbld-midnightbsd4.0 (32-bit)
* R was compiled by
    MidnightBSD clang version 19.1.7 (https://github.com/llvm/llvm-project.git llvmorg-19.1.7-0-gcd708029e0b2)
    GNU Fortran (MidnightBSD Ports Collection) 14.2.0
* running under: MidnightBSD m4032b 4.0.2 MidnightBSD 4.0.2 #2 stable/4.0-n13741-505160cbfb-dirty: Thu Jan 22 01:48:27 EST 2026     root@m4032b:/usr/obj/usr/src/i386.i386/sys/GENERIC i386
* using session charset: ASCII
* using options '--no-manual --no-build-vignettes'
* checking for file 'eco/DESCRIPTION' ... OK
* this is package 'eco' version '4.0-3'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: 'testthat'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'eco' can be installed ... WARNING
Found the following significant warnings:
  gibbsEM.c:235:52: warning: more '%' conversions than data arguments [-Wformat-insufficient-args]
  rand.c:245:13: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
  subroutines.c:141:15: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
  subroutines.c:151:13: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
  subroutines.c:228:13: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
See '/magus/work/usr/mports/science/R-cran-eco/work/eco.Rcheck/00install.out' for details.
* used C compiler: 'MidnightBSD clang version 19.1.7 (https://github.com/llvm/llvm-project.git llvmorg-19.1.7-0-gcd708029e0b2)'
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 ERROR
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  Error in library(testthat) : there is no package called 'testthat'
  Execution halted
* DONE

Status: 1 ERROR, 1 WARNING, 1 NOTE
See
  '/magus/work/usr/mports/science/R-cran-eco/work/eco.Rcheck/00check.log'
for details.

*** Error code 1

Stop.
make: stopped in /usr/mports/science/R-cran-eco